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5.08J Biological Chemistry II (MIT) 5.08J Biological Chemistry II (MIT)

Description

This course deals with a more advanced treatment of the biochemical mechanisms that underlie biological processes. Emphasis will be given to the experimental methods used to unravel how these processes fit into the cellular context as well as the coordinated regulation of these processes. Topics include macromolecular machines for energy and force transduction, regulation of biosynthetic and degradative pathways, and the structure and function of nucleic acids. This course deals with a more advanced treatment of the biochemical mechanisms that underlie biological processes. Emphasis will be given to the experimental methods used to unravel how these processes fit into the cellular context as well as the coordinated regulation of these processes. Topics include macromolecular machines for energy and force transduction, regulation of biosynthetic and degradative pathways, and the structure and function of nucleic acids.

Subjects

biochemistry | biochemistry | biological chemistry | biological chemistry | Rasmol | Rasmol | Deep Viewer | Deep Viewer | CHIME | CHIME | BLAST | BLAST | PDB | PDB | macromolecular machines | macromolecular machines | protein folding | protein folding | protein degradation | protein degradation | fatty acid synthases | fatty acid synthases | polyketide synthases | polyketide synthases | non-ribosomal polypeptide synthases | non-ribosomal polypeptide synthases | metal homeostasis | metal homeostasis | biochemical mechanisms | biochemical mechanisms | biochemical pathways | biochemical pathways | macromolecular interactions | macromolecular interactions | ribosome | ribosome | mRNA | mRNA | metabolic networking | metabolic networking | 5.08 | 5.08 | 7.08 | 7.08

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10.445 Separation Processes for Biochemical Products (MIT) 10.445 Separation Processes for Biochemical Products (MIT)

Description

This course serves as an introduction to the fundamental principles of separation operations for the recovery of products from biological processes, membrane filtration, chromatography, centrifugation, cell disruption, extraction, and process design. This course was last taught during the regular school year in the Spring semester of 1999, but has been a part of the MIT Technology and Development Program (TDP) at the Malaysia University of Science and Technology (MUST), as well as at MIT's Professional Institute in more recent years. This course serves as an introduction to the fundamental principles of separation operations for the recovery of products from biological processes, membrane filtration, chromatography, centrifugation, cell disruption, extraction, and process design. This course was last taught during the regular school year in the Spring semester of 1999, but has been a part of the MIT Technology and Development Program (TDP) at the Malaysia University of Science and Technology (MUST), as well as at MIT's Professional Institute in more recent years.

Subjects

separation operations | separation operations | recovery of products from biological processes | recovery of products from biological processes | membrane filtration | membrane filtration | chromatography | chromatography | centrifugation | centrifugation | cell disruption | cell disruption | extraction | extraction | process design | process design | downstream processing | downstream processing | biochemical product recovery | biochemical product recovery | modes of recovery and purification | modes of recovery and purification | biochemical engineering | biochemical engineering

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see http://ocw.mit.edu/terms/index.htm

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HST.722J Brain Mechanisms for Hearing and Speech (MIT) HST.722J Brain Mechanisms for Hearing and Speech (MIT)

Description

An advanced course covering anatomical, physiological, behavioral, and computational studies of the central nervous system relevant to speech and hearing. Students learn primarily by discussions of scientific papers on topics of current interest. Recent topics include cell types and neural circuits in the auditory brainstem, organization and processing in the auditory cortex, auditory reflexes and descending systems, functional imaging of the human auditory system, quantitative methods for relating neural responses to behavior, speech motor control, cortical representation of language, and auditory learning in songbirds. An advanced course covering anatomical, physiological, behavioral, and computational studies of the central nervous system relevant to speech and hearing. Students learn primarily by discussions of scientific papers on topics of current interest. Recent topics include cell types and neural circuits in the auditory brainstem, organization and processing in the auditory cortex, auditory reflexes and descending systems, functional imaging of the human auditory system, quantitative methods for relating neural responses to behavior, speech motor control, cortical representation of language, and auditory learning in songbirds.

Subjects

HST.722 | HST.722 | 9.044 | 9.044 | separation operations | separation operations | recovery of products from biological processes | recovery of products from biological processes | membrane filtration | membrane filtration | chromatography | chromatography | centrifugation | centrifugation | cell disruption | cell disruption | extraction | extraction | process design | process design | downstream processing | downstream processing | biochemical product recovery | biochemical product recovery | modes of recovery and purification | modes of recovery and purification | biochemical engineering | biochemical engineering | hearing | hearing | speech | speech | auditory brainstem | auditory brainstem | auditory cortex | auditory cortex | auditory reflexes | auditory reflexes | descending systems | descending systems | human auditory system | human auditory system | speech motor control | speech motor control | auditory learning | auditory learning | cortical representation | cortical representation | dorsal cochlear nucleus | dorsal cochlear nucleus | neural coding | neural coding | thalamo-cortical organization | thalamo-cortical organization | thalamo-cortical processing | thalamo-cortical processing | audio-visual integration | audio-visual integration

License

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5.32 Intermediate Chemical Experimentation (MIT) 5.32 Intermediate Chemical Experimentation (MIT)

Description

5.32 involves more advanced experimental work than 5.310 or 5.311. The course emphasizes organic synthesis assisted by chiral catalysis, purification, and analysis of organic compounds employing such methods as IR, 1D and 2D NMR, UV spectroscopies and mass spectrometry, and thin layer and non-chiral and chiral gas chromatography. In 5.32, experiments also involve enzyme purification, characterization and assays, as well as molecular modeling in organic synthesis and in biochemical systems. WARNING NOTICE The experiments described in these materials are potentially hazardous and require a high level of safety training, special facilities and equipment, and supervision by appropriate individuals. You bear the sole responsibility, liability, and risk for the implementation of such 5.32 involves more advanced experimental work than 5.310 or 5.311. The course emphasizes organic synthesis assisted by chiral catalysis, purification, and analysis of organic compounds employing such methods as IR, 1D and 2D NMR, UV spectroscopies and mass spectrometry, and thin layer and non-chiral and chiral gas chromatography. In 5.32, experiments also involve enzyme purification, characterization and assays, as well as molecular modeling in organic synthesis and in biochemical systems. WARNING NOTICE The experiments described in these materials are potentially hazardous and require a high level of safety training, special facilities and equipment, and supervision by appropriate individuals. You bear the sole responsibility, liability, and risk for the implementation of such

Subjects

intermediate chemical experimentation | intermediate chemical experimentation | experiment | experiment | chemistry | chemistry | organic synthesis | organic synthesis | chiral catalysis | chiral catalysis | purification | purification | organic chemistry | organic chemistry | laboratory | laboratory | IR | IR | 1D NMR | 1D NMR | 2D NMR | 2D NMR | UV spectroscopy | UV spectroscopy | mass spectrometry | mass spectrometry | thin layer gas chromatography | thin layer gas chromatography | non-chiral gas chromatography | non-chiral gas chromatography | chiral gas chromatography | chiral gas chromatography | enzyme purification | enzyme purification | characterization | characterization | assays | assays | molecular modeling | molecular modeling | biochemical systems | biochemical systems

License

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7.342 Systems and Synthetic Biology: How the Cell Solves Problems (MIT) 7.342 Systems and Synthetic Biology: How the Cell Solves Problems (MIT)

Description

A millennial challenge in biology is to decipher how vast arrays of molecular interactions inside the cell work in concert to produce a cellular function. Systems biology, a new interdisciplinary field of science, brings together biologists and physicists to tackle this grand challenge through quantitative experiments and models. In this course, we will discuss the unifying principles that all organisms use to perform cellular functions. We will also discuss key challenges faced by a cell in both single and multi-cellular organisms. Finally, we will discuss how researchers in the field of synthetic biology are using the new knowledge gained from studying naturally-occurring biological systems to create artificial gene networks capable of performing new functions. This course is one of many A millennial challenge in biology is to decipher how vast arrays of molecular interactions inside the cell work in concert to produce a cellular function. Systems biology, a new interdisciplinary field of science, brings together biologists and physicists to tackle this grand challenge through quantitative experiments and models. In this course, we will discuss the unifying principles that all organisms use to perform cellular functions. We will also discuss key challenges faced by a cell in both single and multi-cellular organisms. Finally, we will discuss how researchers in the field of synthetic biology are using the new knowledge gained from studying naturally-occurring biological systems to create artificial gene networks capable of performing new functions. This course is one of many

Subjects

systems biology | systems biology | synthetic biology | synthetic biology | cell | cell | cellular functions | cellular functions | biological systems | biological systems | artificial gene networks | artificial gene networks | molecular interactions | molecular interactions | molecular biology | molecular biology | genes | genes | RNA | RNA | proteins | proteins | macromolecules | macromolecules | intracellular biochemical interactions | intracellular biochemical interactions | extracellular molecules | extracellular molecules | gene expression | gene expression | stochastic gene expression | stochastic gene expression

License

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7.28 Molecular Biology (MIT) 7.28 Molecular Biology (MIT)

Description

This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized. This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized.

Subjects

molecular biology | molecular biology | biochemical mechanisms | biochemical mechanisms | gene expression | gene expression | evolution | evolution | prokaryotic genome | prokaryotic genome | eukaryotic genomes | eukaryotic genomes | gene regulation | gene regulation | DNA replication | DNA replication | genetic recombination | genetic recombination | RNA processing | RNA processing | translation | translation | genome | genome

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see http://ocw.mit.edu/terms/index.htm

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10.445 Separation Processes for Biochemical Products (MIT)

Description

This course serves as an introduction to the fundamental principles of separation operations for the recovery of products from biological processes, membrane filtration, chromatography, centrifugation, cell disruption, extraction, and process design. This course was last taught during the regular school year in the Spring semester of 1999, but has been a part of the MIT Technology and Development Program (TDP) at the Malaysia University of Science and Technology (MUST), as well as at MIT's Professional Institute in more recent years.

Subjects

separation operations | recovery of products from biological processes | membrane filtration | chromatography | centrifugation | cell disruption | extraction | process design | downstream processing | biochemical product recovery | modes of recovery and purification | biochemical engineering

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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5.08J Biological Chemistry II (MIT)

Description

This course deals with a more advanced treatment of the biochemical mechanisms that underlie biological processes. Emphasis will be given to the experimental methods used to unravel how these processes fit into the cellular context as well as the coordinated regulation of these processes. Topics include macromolecular machines for energy and force transduction, regulation of biosynthetic and degradative pathways, and the structure and function of nucleic acids.

Subjects

biochemistry | biological chemistry | Rasmol | Deep Viewer | CHIME | BLAST | PDB | macromolecular machines | protein folding | protein degradation | fatty acid synthases | polyketide synthases | non-ribosomal polypeptide synthases | metal homeostasis | biochemical mechanisms | biochemical pathways | macromolecular interactions | ribosome | mRNA | metabolic networking | 5.08 | 7.08

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.016 Introductory Biology (MIT) 7.016 Introductory Biology (MIT)

Description

7.016 Introductory Biology provides an introduction to fundamental principles of biochemistry, molecular biology and genetics for understanding the functions of living systems. Taught for the first time in Fall 2013, this course covers examples of the use of chemical biology and twenty-first-century molecular genetics in understanding human health and therapeutic intervention. The MIT Biology Department Introductory Biology courses, 7.012, 7.013, 7.014, 7.015, and 7.016 all cover the same core material, which includes the fundamental principles of biochemistry, genetics, molecular biology, and cell biology. Biological function at the molecular level is particularly emphasized and covers the structure and regulation of genes, as well as the structure and synthesis of proteins, how these mol 7.016 Introductory Biology provides an introduction to fundamental principles of biochemistry, molecular biology and genetics for understanding the functions of living systems. Taught for the first time in Fall 2013, this course covers examples of the use of chemical biology and twenty-first-century molecular genetics in understanding human health and therapeutic intervention. The MIT Biology Department Introductory Biology courses, 7.012, 7.013, 7.014, 7.015, and 7.016 all cover the same core material, which includes the fundamental principles of biochemistry, genetics, molecular biology, and cell biology. Biological function at the molecular level is particularly emphasized and covers the structure and regulation of genes, as well as the structure and synthesis of proteins, how these mol

Subjects

biochemistry | biochemistry | molecular biology | molecular biology | genetics | genetics | human genetics | human genetics | pedigrees | pedigrees | biochemical genetics | biochemical genetics | chemical biology | chemical biology | molecular genetics | molecular genetics | recombinant DNA technology | recombinant DNA technology | cell biology | cell biology | cancer | cancer | viruses | viruses | HIV | HIV | bacteria | bacteria | antibiotics | antibiotics | human health | human health | therapeutic intervention | therapeutic intervention | cell signaling | cell signaling | evolution | evolution | reproduction | reproduction | infectious diseases | infectious diseases | therapeutics | therapeutics

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see http://ocw.mit.edu/terms/index.htm

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The genetics of metabolic diseases

Description

A missing step in a metabolic pathway leads to the build-up of toxic compounds, and the lack of materials essential for normal function. Professor Wyatt Yue explores how genetic defects lead to disease at the molecular level, by determining 3D structures and biochemical properties of enzymes and protein complexes linked to congenital genetic errors. Professor Yue works closely with clinicians and paediatricians to decipher the underlying genetic, biochemical and cellular mechanisms of these diseases. His long-term aim is to help design novel therapeutic approaches for metabolic diseases. Wales; http://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Subjects

matabolic | genetics | enzymes | biochemical | cellular | mechanisms | matabolic | genetics | enzymes | biochemical | cellular | mechanisms

License

http://creativecommons.org/licenses/by-nc-sa/2.0/uk/

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The genetics of metabolic diseases

Description

A missing step in a metabolic pathway leads to the build-up of toxic compounds, and the lack of materials essential for normal function. Professor Wyatt Yue explores how genetic defects lead to disease at the molecular level, by determining 3D structures and biochemical properties of enzymes and protein complexes linked to congenital genetic errors. Professor Yue works closely with clinicians and paediatricians to decipher the underlying genetic, biochemical and cellular mechanisms of these diseases. His long-term aim is to help design novel therapeutic approaches for metabolic diseases. Wales; http://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Subjects

matabolic | genetics | enzymes | biochemical | cellular | mechanisms | matabolic | genetics | enzymes | biochemical | cellular | mechanisms

License

http://creativecommons.org/licenses/by-nc-sa/2.0/uk/

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2.18 Biomolecular Feedback Systems (MIT) 2.18 Biomolecular Feedback Systems (MIT)

Description

This course focuses on feedback control mechanisms that living organisms implement at the molecular level to execute their functions, with emphasis on techniques to design novel systems with prescribed behaviors. Students will learn how biological functions can be understood and designed using notions from feedback control. This course focuses on feedback control mechanisms that living organisms implement at the molecular level to execute their functions, with emphasis on techniques to design novel systems with prescribed behaviors. Students will learn how biological functions can be understood and designed using notions from feedback control.

Subjects

biomolecular feedback systems | biomolecular feedback systems | systems biology | systems biology | modeling | modeling | feedback | feedback | cell | cell | system | system | control | control | dynamical | dynamical | input/output | input/output | synthetic biology | synthetic biology | techniques | techniques | transcription | transcription | translation | translation | transcriptional regulation | transcriptional regulation | post-transcriptional regulation | post-transcriptional regulation | cellular subsystems | cellular subsystems | dynamic behavior | dynamic behavior | analysis | analysis | equilibrium | equilibrium | robustness | robustness | oscillatory behavior | oscillatory behavior | bifurcations | bifurcations | model reduction | model reduction | stochastic | stochastic | biochemical | biochemical | simulation | simulation | linear | linear | circuit | circuit | design | design | biological circuit design | biological circuit design | negative autoregulation | negative autoregulation | toggle switch | toggle switch | repressilator | repressilator | activator-repressor clock | activator-repressor clock | IFFL | IFFL | incoherent feedforward loop | incoherent feedforward loop | bacterial chemotaxis | bacterial chemotaxis | interconnecting components | interconnecting components | modularity | modularity | retroactivity | retroactivity | gene circuit | gene circuit

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see http://ocw.mit.edu/terms/index.htm

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HST.722J Brain Mechanisms for Hearing and Speech (MIT)

Description

An advanced course covering anatomical, physiological, behavioral, and computational studies of the central nervous system relevant to speech and hearing. Students learn primarily by discussions of scientific papers on topics of current interest. Recent topics include cell types and neural circuits in the auditory brainstem, organization and processing in the auditory cortex, auditory reflexes and descending systems, functional imaging of the human auditory system, quantitative methods for relating neural responses to behavior, speech motor control, cortical representation of language, and auditory learning in songbirds.

Subjects

HST.722 | 9.044 | separation operations | recovery of products from biological processes | membrane filtration | chromatography | centrifugation | cell disruption | extraction | process design | downstream processing | biochemical product recovery | modes of recovery and purification | biochemical engineering | hearing | speech | auditory brainstem | auditory cortex | auditory reflexes | descending systems | human auditory system | speech motor control | auditory learning | cortical representation | dorsal cochlear nucleus | neural coding | thalamo-cortical organization | thalamo-cortical processing | audio-visual integration

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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10.445 Separation Processes for Biochemical Products (MIT)

Description

This course serves as an introduction to the fundamental principles of separation operations for the recovery of products from biological processes, membrane filtration, chromatography, centrifugation, cell disruption, extraction, and process design. This course was last taught during the regular school year in the Spring semester of 1999, but has been a part of the MIT Technology and Development Program (TDP) at the Malaysia University of Science and Technology (MUST), as well as at MIT's Professional Institute in more recent years.

Subjects

separation operations | recovery of products from biological processes | membrane filtration | chromatography | centrifugation | cell disruption | extraction | process design | downstream processing | biochemical product recovery | modes of recovery and purification | biochemical engineering

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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5.08J Biological Chemistry II (MIT)

Description

This course deals with a more advanced treatment of the biochemical mechanisms that underlie biological processes. Emphasis will be given to the experimental methods used to unravel how these processes fit into the cellular context as well as the coordinated regulation of these processes. Topics include macromolecular machines for energy and force transduction, regulation of biosynthetic and degradative pathways, and the structure and function of nucleic acids.

Subjects

biochemistry | biological chemistry | Rasmol | Deep Viewer | CHIME | BLAST | PDB | macromolecular machines | protein folding | protein degradation | fatty acid synthases | polyketide synthases | non-ribosomal polypeptide synthases | metal homeostasis | biochemical mechanisms | biochemical pathways | macromolecular interactions | ribosome | mRNA | metabolic networking | 5.08 | 7.08

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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Biochemical Engineering

Description

/Biochemical_Engineering Biochemical processes, thermodynamics, and kinetics are used in the application of engineering principles to analyze, design, and develop processes using biocatalysts. Processes covered in the course include those that are involved in the formation of desirable compounds and products or in the transformation, or destruction of unwanted or toxic substances.

Subjects

biochemical | engineering | irrigation | biological

License

http://creativecommons.org/licenses/by-nc-sa/2.5/

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7.28 Molecular Biology (MIT)

Description

This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized.

Subjects

molecular biology | biochemical mechanisms | gene expression | evolution | prokaryotic genome | eukaryotic genomes | gene regulation | DNA replication | genetic recombination | RNA processing | translation | genome

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.28 Molecular Biology (MIT)

Description

This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized.

Subjects

molecular biology | biochemical mechanisms | gene expression | evolution | prokaryotic genome | eukaryotic genomes | gene regulation | DNA replication | genetic recombination | RNA processing | translation | genome

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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5.32 Intermediate Chemical Experimentation (MIT)

Description

5.32 involves more advanced experimental work than 5.310 or 5.311. The course emphasizes organic synthesis assisted by chiral catalysis, purification, and analysis of organic compounds employing such methods as IR, 1D and 2D NMR, UV spectroscopies and mass spectrometry, and thin layer and non-chiral and chiral gas chromatography. In 5.32, experiments also involve enzyme purification, characterization and assays, as well as molecular modeling in organic synthesis and in biochemical systems. WARNING NOTICE The experiments described in these materials are potentially hazardous and require a high level of safety training, special facilities and equipment, and supervision by appropriate individuals. You bear the sole responsibility, liability, and risk for the implementation of such

Subjects

intermediate chemical experimentation | experiment | chemistry | organic synthesis | chiral catalysis | purification | organic chemistry | laboratory | IR | 1D NMR | 2D NMR | UV spectroscopy | mass spectrometry | thin layer gas chromatography | non-chiral gas chromatography | chiral gas chromatography | enzyme purification | characterization | assays | molecular modeling | biochemical systems

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.28 Molecular Biology (MIT)

Description

This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized.

Subjects

molecular biology | biochemical mechanisms | gene expression | evolution | prokaryotic genome | eukaryotic genomes | gene regulation | DNA replication | genetic recombination | RNA processing | translation | genome

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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2.18 Biomolecular Feedback Systems (MIT)

Description

This course focuses on feedback control mechanisms that living organisms implement at the molecular level to execute their functions, with emphasis on techniques to design novel systems with prescribed behaviors. Students will learn how biological functions can be understood and designed using notions from feedback control.

Subjects

biomolecular feedback systems | systems biology | modeling | feedback | cell | system | control | dynamical | input/output | synthetic biology | techniques | transcription | translation | transcriptional regulation | post-transcriptional regulation | cellular subsystems | dynamic behavior | analysis | equilibrium | robustness | oscillatory behavior | bifurcations | model reduction | stochastic | biochemical | simulation | linear | circuit | design | biological circuit design | negative autoregulation | toggle switch | repressilator | activator-repressor clock | IFFL | incoherent feedforward loop | bacterial chemotaxis | interconnecting components | modularity | retroactivity | gene circuit

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.016 Introductory Biology (MIT)

Description

7.016 Introductory Biology provides an introduction to fundamental principles of biochemistry, molecular biology and genetics for understanding the functions of living systems. Taught for the first time in Fall 2013, this course covers examples of the use of chemical biology and twenty-first-century molecular genetics in understanding human health and therapeutic intervention. The MIT Biology Department Introductory Biology courses, 7.012, 7.013, 7.014, 7.015, and 7.016 all cover the same core material, which includes the fundamental principles of biochemistry, genetics, molecular biology, and cell biology. Biological function at the molecular level is particularly emphasized and covers the structure and regulation of genes, as well as the structure and synthesis of proteins, how these mol

Subjects

biochemistry | molecular biology | genetics | human genetics | pedigrees | biochemical genetics | chemical biology | molecular genetics | recombinant DNA technology | cell biology | cancer | viruses | HIV | bacteria | antibiotics | human health | therapeutic intervention | cell signaling | evolution | reproduction | infectious diseases | therapeutics

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.342 Systems and Synthetic Biology: How the Cell Solves Problems (MIT)

Description

A millennial challenge in biology is to decipher how vast arrays of molecular interactions inside the cell work in concert to produce a cellular function. Systems biology, a new interdisciplinary field of science, brings together biologists and physicists to tackle this grand challenge through quantitative experiments and models. In this course, we will discuss the unifying principles that all organisms use to perform cellular functions. We will also discuss key challenges faced by a cell in both single and multi-cellular organisms. Finally, we will discuss how researchers in the field of synthetic biology are using the new knowledge gained from studying naturally-occurring biological systems to create artificial gene networks capable of performing new functions. This course is one of many

Subjects

systems biology | synthetic biology | cell | cellular functions | biological systems | artificial gene networks | molecular interactions | molecular biology | genes | RNA | proteins | macromolecules | intracellular biochemical interactions | extracellular molecules | gene expression | stochastic gene expression

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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7.28 Molecular Biology (MIT)

Description

This course covers a detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. The topics covered in lectures and readings of relevant literature include gene regulation, DNA replication, genetic recombination, and mRNA translation. In particular, the logic of experimental design and data analysis is emphasized.

Subjects

molecular biology | biochemical mechanisms | gene expression | evolution | prokaryotic genome | eukaryotic genomes | gene regulation | DNA replication | genetic recombination | RNA processing | translation | genome

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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5.32 Intermediate Chemical Experimentation (MIT)

Description

5.32 involves more advanced experimental work than 5.310 or 5.311. The course emphasizes organic synthesis assisted by chiral catalysis, purification, and analysis of organic compounds employing such methods as IR, 1D and 2D NMR, UV spectroscopies and mass spectrometry, and thin layer and non-chiral and chiral gas chromatography. In 5.32, experiments also involve enzyme purification, characterization and assays, as well as molecular modeling in organic synthesis and in biochemical systems. WARNING NOTICE The experiments described in these materials are potentially hazardous and require a high level of safety training, special facilities and equipment, and supervision by appropriate individuals. You bear the sole responsibility, liability, and risk for the implementation of such

Subjects

intermediate chemical experimentation | experiment | chemistry | organic synthesis | chiral catalysis | purification | organic chemistry | laboratory | IR | 1D NMR | 2D NMR | UV spectroscopy | mass spectrometry | thin layer gas chromatography | non-chiral gas chromatography | chiral gas chromatography | enzyme purification | characterization | assays | molecular modeling | biochemical systems

License

Content within individual OCW courses is (c) by the individual authors unless otherwise noted. MIT OpenCourseWare materials are licensed by the Massachusetts Institute of Technology under a Creative Commons License (Attribution-NonCommercial-ShareAlike). For further information see https://ocw.mit.edu/terms/index.htm

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